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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852334.1_cds_XP_016511816.1_24519
CDS Infomation

[gene=LOC107828938] [db_xref=GeneID:107828938] [protein=glucose-6-phosphate 1-dehydrogenase, chloroplastic isoform X1] [protein_id=XP_016511816.1] [location=join(10142..10331,11331..11563,12619..12713,12845..12959,13798..14003,14085..14234,14321..14441,14521..14750,14833..15033,15592..15832)] [gbkey=CDS]
Sequence

ATGGTGACCCTTTATTCTTCTCCTTCAACCCATTCTTCTGGGCCAGTTGCTTCTTACTCT
AATTCCTCTATTGGGCTCTATAATTATCATCATAATAAGCAGATAGCAGTTTCTTCAATT
TTGTCGAGAAAGTTTGGTTCTTTGCAAATTAATCAGAAGCCATTTTGGAATGCCGTTCGC
ATGCAAGATGGTGCAGTAGCGATTCCGCCTAGCAAAATCGAAAATGAGACTCCTTTGAAG
AAATTAAAAAATGGAATTTCGCCAGTCGCACCTCCAAAGGAGCAGAAAGATACAATTGAT
TTCGACAGCAACAAAGCTAAATCAACTGTCAGTATTACTGTTGTTGGTGCTTCAGGAGAT
CTTGCCAAGAAAAAGATATTTCCTGCACTGTTTGCACTTTATTATGAGGGTTGCCTCCCT
GAGCATTTCACTATCTTTGGCTATGCCCGGAGTAAGATGACTGATGCTGAACTACGGAAC
ATGGTTAGCAAGACCCTTACTTGCAGGATTGACAAGAGGGAAAATTGTGGTGAAAAGATG
GAACAGTTTTTAGAAAGGTGCTTCTACCACAGCGGCCAATACGATTCCCTGGAAAACTTT
GCGGAGCTCGATAAAAAGCTGAAGGAACATGAGGCAGGAAGGTTTTCCAATCGTCTATTC
TACTTATCCATTCCACCAAATATTTTTATAAATGCGGTTCGATGTGCTAGCCTCTCTGCA
TCATCTGCTCATGGCTGGACAAGAGTCATTGTAGAGAAACCCTTTGGTCGGGATTCTGAA
TCCTCTGCTGCATTGACAAGATCTCTTAAGCAGTACTTGAATGAAGACCAAATTTTTAGG
ATCGATCACTATTTAGGGAAGGAGCTTGTGGAAAACCTTTCTGTCCTTCGTTTCTCCAAC
TTGATATTTGAACCCTTGTGGTCAAGGCAGTATATAAGGAATGTGCAGTTTATTTTCTCA
GAAGATTTTGGCACTGAAGGACGGGGAGGTTATTTTGATCATTATGGGATAATCAGAGAC
ATCATGCAAAACCATCTGCTTCAAATTCTGGCCCTCTTTGCCATGGAAACACCTGTGAGT
TTGGATGCGGAAGATATCAGAAATGAAAAGGTAAAAGTTCTGCGTTCCATGAGACCTTTA
CAACTAGACGATGTTATCATTGGGCAGTACAAATGTCACACAAAAGGAGATGTTACCTAT
CCCGGTTATACTGACGACAAGACTGTACCGAAGGACAGTCTAACCCCAACTTTTGCTGCA
GCTGCTCTTTTCATAGATAATGCACGATGGGATGGGGTGCCTTTCCTTATGAAAGCTGGG
AAAGCTTTACATACTAGGAGTGCGGAAATAAGAGTACAATTCAGGCACGTACCAGGAAAT
TTATACAATAAGAACTTTGGCTCAGATCTTGACCAGGCGACCAACGAGCTTGTTATCCGT
GTCCAGCCTAATGAAGCTATATACCTAAAGATCAATAACAAAGTTCCTGGTCTAGGAATG
AGATTGGATCGCTGTAATCTTAATCTTCTTTACTCGGCAAGATACTCGAAGGAGATCCCT
GATGCATATGAGCGGCTGCTTCTTGATGCTGTAGAAGGTGAAAGGCGGCTTTTCATCCGC
AGTGATGAGCTGGATGCTGCTTGGTCTCTTTTCACTCCAGTGTTAAAAGAACTTGAGGAT
AAGAAAATAGTTCCAGAATATTACCCCTATGGAAGTCGAGGACCTATTGGAGCACATTAT
CTTGCAGCACGATATAAAGTAAGATGGGGTGATCTTGTGTAG

Peptide Sequence

PEP ID

XP_016511816.1
PEP Infomation

PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic isoform X1 [Nicotiana tabacum]
Sequence

MVTLYSSPSTHSSGPVASYSNSSIGLYNYHHNKQIAVSSILSRKFGSLQINQKPFWNAVR
MQDGAVAIPPSKIENETPLKKLKNGISPVAPPKEQKDTIDFDSNKAKSTVSITVVGASGD
LAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKM
EQFLERCFYHSGQYDSLENFAELDKKLKEHEAGRFSNRLFYLSIPPNIFINAVRCASLSA
SSAHGWTRVIVEKPFGRDSESSAALTRSLKQYLNEDQIFRIDHYLGKELVENLSVLRFSN
LIFEPLWSRQYIRNVQFIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVS
LDAEDIRNEKVKVLRSMRPLQLDDVIIGQYKCHTKGDVTYPGYTDDKTVPKDSLTPTFAA
AALFIDNARWDGVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNKNFGSDLDQATNELVIR
VQPNEAIYLKINNKVPGLGMRLDRCNLNLLYSARYSKEIPDAYERLLLDAVEGERRLFIR
SDELDAAWSLFTPVLKELEDKKIVPEYYPYGSRGPIGAHYLAARYKVRWGDLV

Transcript Sequence

Gene sequence data has not been registered.